Skip to content
View JTL-lab's full-sized avatar
🎯
Focusing
🎯
Focusing
13 followers · 13 following

Achievements

Achievement: YOLOAchievement: Pull Sharkx2Achievement: Quickdraw

Achievements

Achievement: YOLOAchievement: Pull Sharkx2Achievement: Quickdraw

Block or report JTL-lab

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
JTL-lab/README.md
github-julia
  • 🧬 Data Science Associate at the New York Genome Center (@nygenome)
  • 🎓 MSCS at Columbia University, Knowles lab (@daklab)
  • 🦠 Honours BCS at Dalhousie University, Beiko lab (@beiko-lab)
  • 🔬 Actively developing LRP2, an end-to-end long-read proteogenomics pipeline, and IsoformGazer, a webtool for visualizing alternative RNA isoforms
  • 💬 Interested in alternative splicing, RNA-binding proteins, transcriptomics, long-read analysis, proteogenomics, and all things ML
  • 🤝 Open-source contributor!
  • 🌱 Currently learning Airflow and Snowflake
  • 📝 Open to research collaborations and new opportunities!
  • 🔗 LinkedIn
  • 📫 Email: jlewandowski [at] nygenome [dot] org

Languages and Tools:

python postgresql java javascript bash scala pandas numpy matplotlib plotly scikit-learn keras tensorflow pytorch spark docker kubernetes flask linux

Julia's GitHub stats Top Languages

Julia's GitHub stats Top Languages

Pinned Loading

  1. sheynkman-lab/LRP2 sheynkman-lab/LRP2 Public

    A Nextflow pipeline for end-to-end long-read proteogenomics analysis

    Nextflow 13 1

  2. daklab/IsoformGazer daklab/IsoformGazer Public

    A webtool for visualizing alternative RNA isoforms across integrated long-read RNA-seq and pseudobulked single-cell short-read RNA-seq data.

    Python 2

  3. Gene-Order-Workflow Gene-Order-Workflow Public

    A Nextflow based scientific workflow for gene order analysis of bacterial genomes.

    Python 4 1

  4. Coeus Coeus Public

    A Plotly dashboard application for easy visual exploration of gene neighborhood data.

    HTML 1

  5. AnimalDiffusion AnimalDiffusion Public

    A methodology to generate synthetic clinical animal data using generative diffusion models.

    Jupyter Notebook

  6. Halifax-Housing-Analysis Halifax-Housing-Analysis Public

    Analysis of Halifax (NS) housing trends including costs of housing vs rent, gentrification, and population density.

    HTML